Conformational Shannon Entropy of mRNA Structures from Force Spectroscopy Measurements Predicts the Efficiency of <mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML" display="inline"><mml:mo form="prefix">−</mml:mo><mml:mn>1</mml:mn></mml:math> Programmed Ribosomal Frameshift Stimulation
نویسندگان
چکیده
$\ensuremath{-}1$ programmed ribosomal frameshifting ($\ensuremath{-}1\text{ }\text{ }\mathrm{PRF}$) is stimulated by structures in messenger RNA (mRNA), but the factors determining $\ensuremath{-}1\text{ }\mathrm{PRF}$ efficiency are unclear. We show that varies directly with conformational heterogeneity of stimulatory structure, quantified as Shannon entropy state occupancy, for a panel efficiencies from 2% to 80%. The correlation force dependent and vanishes at forces above those applied ribosome. These results support hypothesis heterogeneous dynamics key factor stimulating }\mathrm{PRF}$.
منابع مشابه
assessment of the efficiency of s.p.g.c refineries using network dea
data envelopment analysis (dea) is a powerful tool for measuring relative efficiency of organizational units referred to as decision making units (dmus). in most cases dmus have network structures with internal linking activities. traditional dea models, however, consider dmus as black boxes with no regard to their linking activities and therefore do not provide decision makers with the reasons...
On the Estimation of Shannon Entropy
Shannon entropy is increasingly used in many applications. In this article, an estimator of the entropy of a continuous random variable is proposed. Consistency and scale invariance of variance and mean squared error of the proposed estimator is proved and then comparisons are made with Vasicek's (1976), van Es (1992), Ebrahimi et al. (1994) and Correa (1995) entropy estimators. A simulation st...
متن کاملthe effect of traffic density on the accident externality from driving the case study of tehran
در این پژوهش به بررسی اثر افزایش ترافیک بر روی تعداد تصادفات پرداخته شده است. به این منظور 30 تقاطع در شهر تهران بطور تصادفی انتخاب گردید و تعداد تصادفات ماهیانه در این تقاطعات در طول سالهای 89-90 از سازمان کنترل ترافیک شهر تهران استخراج گردید و با استفاده از مدل داده های تابلویی و نرم افزار eviews مدل خطی و درجه دوم تخمین زده شد و در نهایت این نتیجه حاصل شد که تقاطعات پر ترافیک تر تعداد تصادفا...
15 صفحه اولthe role of task-based techniques on the acquisition of english language structures by the intermediate efl students
this study examines the effetivenss of task-based activities in helping students learn english language structures for a better communication. initially, a michigan test was administered to the two groups of 52 students majoring in english at the allameh ghotb -e- ravandi university to ensure their homogeneity. the students scores on the grammar part of this test were also regarded as their pre...
15 صفحه اولinvestigating the feasibility of a proposed model for geometric design of deployable arch structures
deployable scissor type structures are composed of the so-called scissor-like elements (sles), which are connected to each other at an intermediate point through a pivotal connection and allow them to be folded into a compact bundle for storage or transport. several sles are connected to each other in order to form units with regular polygonal plan views. the sides and radii of the polygons are...
ذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Physical Review Letters
سال: 2021
ISSN: ['1079-7114', '0031-9007', '1092-0145']
DOI: https://doi.org/10.1103/physrevlett.126.038102